Dear all
I am trying to use yambo for a transparent conducting oxide. The DFT runs were made by Quantum Espresso 5.1.2, both the scf and nscf calculations with the option "force_symmorphic=.true." to avoid the use of non-integer translations and with the "automatic" option to sample the first Brillouin zone. I think that this should give a uniform grid of k points. However, upon yambo initialization, I get
<---> [01] CPU structure, Files & I/O Directories
<---> CPU-Threads:1(CPU)-8(threads)
<---> [02] CORE Variables Setup
<---> [02.01] Unit cells
<---> [02.02] Symmetries
<---> [02.03] RL shells
<---> Shells finder | | [000%] --(E) --( <05s>
Shells finder |############################ | [071%] 05s(E) 06 <10s>
Shells finder |########################################| [100%] 09s(E) 09s(X)
<10s> [M 0.026 Gb] Alloc RL_Gshells RL_Eshells ( 0.016)
<10s> [02.04] K-grid lattice
<10s> [02.05] Energies [ev] & Occupations
<10s> [03] Transferred momenta grid
<10s> [RL indx] X grid is not uniform. Gamma point only.
<10s> [04] External corrections
<10s> [05] Game Over & Game summary
I have checked the set of kpoints, and it seems fine to me. It is evident that I am missing something, but I am not able to figure it out. Does anyone have any hints about what may be going on here?
Thanks in advance.
Juanjo
P.S. I am attaching the input and output files for the scf and nscf calculations, as well as the PP I used.
Juan J. Meléndez
Department of Physics
University of Extremadura
Avda. de Elvas, s/n Badajoz (Spain)
X grid is not uniform
Moderators: Davide Sangalli, andrea.ferretti, myrta gruning, Daniele Varsano
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X grid is not uniform
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Juan J. Meléndez
Department of Physics
University of Extremadura
Avda. de Elvas, s/n 06006 Badajoz (Spain)
Email: melendez@unex.es
Department of Physics
University of Extremadura
Avda. de Elvas, s/n 06006 Badajoz (Spain)
Email: melendez@unex.es
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- Joined: Tue Apr 08, 2014 6:05 am
Re: X grid is not uniform
Dear Juan,
I just performed a very quick test on your input files only for scf and it works for me (attached).
The grid is uniform.
In your nscf input file i see calculation='bands', it should be calculation='nscf'.
Bests
Martin
I just performed a very quick test on your input files only for scf and it works for me (attached).
The grid is uniform.
In your nscf input file i see calculation='bands', it should be calculation='nscf'.
Bests
Martin
You do not have the required permissions to view the files attached to this post.
Martin Spenke, PhD Student
Theoretisch-Physikalisches Institut
Universität Hamburg, Germany
Theoretisch-Physikalisches Institut
Universität Hamburg, Germany
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Re: X grid is not uniform
Dear Martin
Thanks for your response. Indeed, I rerun the calculations from the scratch and I got the (expected) uniform k-sampling. It seems that there were some corrupted file in the temporary folder or something strange. Anyway, I can go on now.
Thank you again.
Juanjo
Thanks for your response. Indeed, I rerun the calculations from the scratch and I got the (expected) uniform k-sampling. It seems that there were some corrupted file in the temporary folder or something strange. Anyway, I can go on now.
Thank you again.
Juanjo
Juan J. Meléndez
Department of Physics
University of Extremadura
Avda. de Elvas, s/n 06006 Badajoz (Spain)
Email: melendez@unex.es
Department of Physics
University of Extremadura
Avda. de Elvas, s/n 06006 Badajoz (Spain)
Email: melendez@unex.es
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- Joined: Fri Jan 31, 2014 11:13 am
Re: X grid is not uniform
Dear Juan,
I've also noticed that in your QE input you have set conv_thr=1.d-4,
which is totally fine for the sake of reducing the execution time when running a test, while it looks somehow too coarse for a production calculations (I would set 1.0d-8, at least)
take care
Andrea
I've also noticed that in your QE input you have set conv_thr=1.d-4,
which is totally fine for the sake of reducing the execution time when running a test, while it looks somehow too coarse for a production calculations (I would set 1.0d-8, at least)
take care
Andrea
Andrea Ferretti, PhD
CNR-NANO-S3 and MaX Centre
via Campi 213/A, 41125, Modena, Italy
Tel: +39 059 2055322; Skype: andrea_ferretti
URL: http://www.nano.cnr.it
CNR-NANO-S3 and MaX Centre
via Campi 213/A, 41125, Modena, Italy
Tel: +39 059 2055322; Skype: andrea_ferretti
URL: http://www.nano.cnr.it
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- Posts: 24
- Joined: Tue Jun 17, 2014 11:41 am
Re: X grid is not uniform
Hi Andrea
Thanks for your suggestion. I have a relatively large system (40 atoms in the primitive unit cell), and I thought that conv_thr=1.d-4 (which, I think, is an extensive quantity) would suffice to get adequate KS eigenvalues. I will decrease the parameter.
Take care
Juanjo
Thanks for your suggestion. I have a relatively large system (40 atoms in the primitive unit cell), and I thought that conv_thr=1.d-4 (which, I think, is an extensive quantity) would suffice to get adequate KS eigenvalues. I will decrease the parameter.
Take care
Juanjo
Juan J. Meléndez
Department of Physics
University of Extremadura
Avda. de Elvas, s/n 06006 Badajoz (Spain)
Email: melendez@unex.es
Department of Physics
University of Extremadura
Avda. de Elvas, s/n 06006 Badajoz (Spain)
Email: melendez@unex.es