Host stdio error on running

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Walser52
Posts: 1
Joined: Tue Feb 11, 2025 8:58 am

Host stdio error on running

Post by Walser52 » Tue Feb 11, 2025 1:18 pm

I am trying to install yambo 5.2.4 with GPU (RTX A2000) on Ubuntu 22.04 on a Linux x86 machine. The installation goes without error.

My configuration script is as follows:

Code: Select all

cuda="cuda12.6,cc86"

libxc_libs="-lxc"
libxc_path="/home/naseeb/libxc"
libxc_libdir="/home/naseeb/libxc/lib"
libxc_includedir="/home/naseeb/libxc/include"

./configure FC=nvfortran F77=nvfortran  CC=nvc CPP="gcc -E -P" FPP="nvfortran -Mpreprocess -E" MPIFC=mpif90 \
        --enable-par-linalg \
        --enable-cuda=${cuda} \
        --with-libxc-libs=${libxc_libs} \
        --with-libxc-path=${libxc_path} \
        --with-libxc-libdir=$libxc_libdir \                                                                                                                                      --with-libxc-includedir=${libxc_includedir} 
However when I run `mpirun -np 2 yambo`, I get:

Code: Select all

FIO/stdio: No such file or directory
FIO-F-/OPEN/unit=13/error code returned by host stdio - 2.
 File name = ./LOG/l_setup_CPU_2
 In source file /home/naseeb/yambo-5.2.4/src/interface/INIT_report_and_log_files.F, at line number 98
FIO/stdio: No such file or directory
FIO-F-/OPEN/unit=13/error code returned by host stdio - 2.
 File name = ./LOG/l_setup_CPU_1
 In source file /home/naseeb/yambo-5.2.4/src/interface/INIT_report_and_log_files.F, at line number 98
--------------------------------------------------------------------------
Primary job  terminated normally, but 1 process returned
a non-zero exit code. Per user-direction, the job has been aborted.
--------------------------------------------------------------------------
--------------------------------------------------------------------------
mpirun detected that one or more processes exited with non-zero status, thus causing
the job to be terminated. The first process to do so was:

  Process name: [[32616,1],1]
  Exit code:    127
--------------------------------------------------------------------------

Can someone please help?

User avatar
Nicola Spallanzani
Posts: 93
Joined: Thu Nov 21, 2019 10:15 am

Re: Host stdio error on running

Post by Nicola Spallanzani » Wed Feb 12, 2025 3:06 pm

Dear,
please sign your posts with your name and affiliation, this is a rule of the forum, and you can do once for all by filling your user profile.

The installation options are fine. Before running yambo, have you launched the executable p2y to convert pw.x output in yambo format?

Best,
Nicola
Nicola Spallanzani, PhD
S3 Centre, Istituto Nanoscienze CNR and MaX Center, Italy
MaX - Materials design at the Exascale
http://www.nano.cnr.it
http://www.max-centre.eu

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