crash in mod_timing.f90

[martin.gmitra]

Dear yambo developers,

I am experiencing yambo crash with the following error message:

Code: Select all

At line 229 of file mod_timing.f90
Fortran runtime error: Unexpected element '*' in format
(a,**x,a)
   ^

I think this might be related with the nodes numbering which in that case
goes in parallel over 100. From the last hint in the "l-*" output file I can deduce that some
nodes "**" finished calculations:
<12h-06m-36s> P**: G0W0 PPA |####################| [100%] 12h-05m-46s(E) 12h-05m-46s(X)

Thank you in advance for any hints.
Best regards,

[Daniele Varsano]

Dear Martin,
what version of Yambo are you using?
Anyway the problem looks related as you say to the format. You can try to substitute the i2.2 in the mode_timing module
with i3.3. May someone else can give you a better workaround.

Cheers,

Daniele

[martin.gmitra]

Dear Daniele,

Thanks for your replay. I am running devel version, revision 48.
In the mod_timing.f90 there are several hash hints, and I am not sure
If I am able to change all of them consistently.

Best,

[Daniele Varsano]

Dear Martin,
the source has been modified, update your source using

Code: Select all

svn up

recompile and let us know if your problem is solved.

Best,

Daniele

[martin.gmitra]

Dear Daniele,
Thanks for the update. It seems that job successfully restarted. I have a small request,
could you also implement the change to src/io/Fragments_Restart.F file as we discussed
in viewtopic.php?f=10&t=701 post?

Thanks for your help,

[martin.gmitra]

I am sorry! I have been too fast. The error

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At line 229 of file mod_timing.f90
Fortran runtime error: Unexpected element '*' in format
(a,**x,a)
   ^

is still there!

[andrea marini]

This is strange. Did you do a

Code: Select all

>make clean_all 

first ? With how many cpu are you trying to run ? Can you run with few cpu's ?

Andrea

[martin.gmitra]

Yes, I did clean_all, recompiled yambo from scratch and run using 80 cores.
Job restarted, completed several thousands of sections and crashed after
five hours.

[andrea marini]

Is it the crash still related to mod_timing ? If yes can you provide all relevant input files (GS and Yambo) ? But we need first to reproduce the error with a smaller run. Can you try to reduce the parameters as much as possible in order to reproduce the error ?

Andrea

[martin.gmitra]

Dear all,
Finally I have realized that troubles were due to interrupted y2p run (walltime limit on cluster).
Continuation somehow provides ill databases. Redoing databases from scratch I have been
able successfully finish the calculations.

Thanks for your participation,