Instructions ypp -r
Moderators: Davide Sangalli, andrea marini, Daniele Varsano
- amolina
- Posts: 135
- Joined: Fri Jul 15, 2011 11:23 am
- Location: Valencia, Spain
- Contact:
Instructions ypp -r
Dear all,
I am doing the steps to speed up the calculations of the BSE ( http://www.yambo-code.org/input_file/ypp/ypp_rim.php ) but I don't undertand the point 7.
Do we have to re-run again yambo with the same input file? I get the same results if I do so.
How can I tell YAMBO to do the calculation using E-RIM?
Thanks in advance,
Alejandro.
I am doing the steps to speed up the calculations of the BSE ( http://www.yambo-code.org/input_file/ypp/ypp_rim.php ) but I don't undertand the point 7.
Do we have to re-run again yambo with the same input file? I get the same results if I do so.
How can I tell YAMBO to do the calculation using E-RIM?
Thanks in advance,
Alejandro.
Last edited by Davide Sangalli on Fri Jun 06, 2014 3:14 pm, edited 1 time in total.
Reason: Link fixed
Reason: Link fixed
Alejandro Molina-Sánchez
Institute of Materials Science (ICMUV)
University of Valencia, Spain
Institute of Materials Science (ICMUV)
University of Valencia, Spain
- claudio
- Posts: 458
- Joined: Tue Mar 31, 2009 11:33 pm
- Location: Marseille
- Contact:
Re: Instructions ypp -r
Dear Alejandero
>I am doing the steps to speed up the calculations of the BSE ( http://www.yambo-code.org/input_file/ypp/ypp_rim.php ) but I don't undertand the point 7.
>Do we have to re-run again yambo with the same input file? I get the same results if I do so.
yes, but you should get a different result.
Did you have the file ndb.E_RIM in your SAVE folder?
Cla
>I am doing the steps to speed up the calculations of the BSE ( http://www.yambo-code.org/input_file/ypp/ypp_rim.php ) but I don't undertand the point 7.
>Do we have to re-run again yambo with the same input file? I get the same results if I do so.
yes, but you should get a different result.
Did you have the file ndb.E_RIM in your SAVE folder?
Cla
Claudio Attaccalite
[CNRS/ Aix-Marseille Université/ CINaM laborarory / TSN department
Campus de Luminy – Case 913
13288 MARSEILLE Cedex 09
web site: http://www.attaccalite.com
[CNRS/ Aix-Marseille Université/ CINaM laborarory / TSN department
Campus de Luminy – Case 913
13288 MARSEILLE Cedex 09
web site: http://www.attaccalite.com
- amolina
- Posts: 135
- Joined: Fri Jul 15, 2011 11:23 am
- Location: Valencia, Spain
- Contact:
Re: Instructions ypp -r
Ciao Claudio,
OK, I could do for RPA, (options yambo -o c). But not for the BSE calculations (yambo -b -o b ). One has to do something different?
Cheers,
Alejandro.
OK, I could do for RPA, (options yambo -o c). But not for the BSE calculations (yambo -b -o b ). One has to do something different?
Cheers,
Alejandro.
Alejandro Molina-Sánchez
Institute of Materials Science (ICMUV)
University of Valencia, Spain
Institute of Materials Science (ICMUV)
University of Valencia, Spain
- claudio
- Posts: 458
- Joined: Tue Mar 31, 2009 11:33 pm
- Location: Marseille
- Contact:
Re: Instructions ypp -r
Ciaio Alejandro
for BSE you have to do
yambo -b -o b -y i
Cla
for BSE you have to do
yambo -b -o b -y i
Cla
Claudio Attaccalite
[CNRS/ Aix-Marseille Université/ CINaM laborarory / TSN department
Campus de Luminy – Case 913
13288 MARSEILLE Cedex 09
web site: http://www.attaccalite.com
[CNRS/ Aix-Marseille Université/ CINaM laborarory / TSN department
Campus de Luminy – Case 913
13288 MARSEILLE Cedex 09
web site: http://www.attaccalite.com
- amolina
- Posts: 135
- Joined: Fri Jul 15, 2011 11:23 am
- Location: Valencia, Spain
- Contact:
Re: Instructions ypp -r
Ciao,
OK, now it works. Sometimes I got this message:
[BSE INV] Non converged frequencies : 281
Is there anyway to remediate this?
Cheers,
Alejandro.
OK, now it works. Sometimes I got this message:
[BSE INV] Non converged frequencies : 281
Is there anyway to remediate this?
Cheers,
Alejandro.
Alejandro Molina-Sánchez
Institute of Materials Science (ICMUV)
University of Valencia, Spain
Institute of Materials Science (ICMUV)
University of Valencia, Spain
- amolina
- Posts: 135
- Joined: Fri Jul 15, 2011 11:23 am
- Location: Valencia, Spain
- Contact:
Re: Instructions ypp -r
Hi,
I have been trying different things for this problem with yambo -i
If somebody has had similar problems:
A first option is to reduce the number of BSE bands.
Cheers,
Alejandro.
I have been trying different things for this problem with yambo -i
If somebody has had similar problems:
A first option is to reduce the number of BSE bands.
Cheers,
Alejandro.
Alejandro Molina-Sánchez
Institute of Materials Science (ICMUV)
University of Valencia, Spain
Institute of Materials Science (ICMUV)
University of Valencia, Spain
- claudio
- Posts: 458
- Joined: Tue Mar 31, 2009 11:33 pm
- Location: Marseille
- Contact:
Re: Instructions ypp -r
Dear Alejandro
your output should be something like:
<06s> [06.01] Inversion solver
<06s> Green`s function |####################| [100%] --(E) --(X)
<06s> Freq loop [pert] |####################| [100%] --(E) --(X)
<06s> [BSE INV] Non converged frequencies : 77
<07s> Freq loop [full] |####################| [100%] --(E) --(X)
<07s> [BSE INV] Converged frequencies (after full inv) [o/o]: 100.0000
<07s> [07] Game Over & Game summary
if YAMBO is not able to converge some frequencies with the perturbative approach,
than it tries with the full inversion [full] and if at the end of the run you get the message
<07s> [BSE INV] Converged frequencies (after full inv) [o/o]: 100.0000
the calculation is correct.
Let me know if this is the case
Ciao
Claudio
your output should be something like:
<06s> [06.01] Inversion solver
<06s> Green`s function |####################| [100%] --(E) --(X)
<06s> Freq loop [pert] |####################| [100%] --(E) --(X)
<06s> [BSE INV] Non converged frequencies : 77
<07s> Freq loop [full] |####################| [100%] --(E) --(X)
<07s> [BSE INV] Converged frequencies (after full inv) [o/o]: 100.0000
<07s> [07] Game Over & Game summary
if YAMBO is not able to converge some frequencies with the perturbative approach,
than it tries with the full inversion [full] and if at the end of the run you get the message
<07s> [BSE INV] Converged frequencies (after full inv) [o/o]: 100.0000
the calculation is correct.
Let me know if this is the case
Ciao
Claudio
Claudio Attaccalite
[CNRS/ Aix-Marseille Université/ CINaM laborarory / TSN department
Campus de Luminy – Case 913
13288 MARSEILLE Cedex 09
web site: http://www.attaccalite.com
[CNRS/ Aix-Marseille Université/ CINaM laborarory / TSN department
Campus de Luminy – Case 913
13288 MARSEILLE Cedex 09
web site: http://www.attaccalite.com
- amolina
- Posts: 135
- Joined: Fri Jul 15, 2011 11:23 am
- Location: Valencia, Spain
- Contact:
Re: Instructions ypp -r
Hi Claudio,
I got exactly this message when it works. But sometimes stop after the message "Non converged frequencies: 40". Maybe due to memory requirements...
Anyway, the results for Bethe-Salpeter are awesome!
Thanks,
Alejandro.
I got exactly this message when it works. But sometimes stop after the message "Non converged frequencies: 40". Maybe due to memory requirements...
Anyway, the results for Bethe-Salpeter are awesome!
Thanks,
Alejandro.
Alejandro Molina-Sánchez
Institute of Materials Science (ICMUV)
University of Valencia, Spain
Institute of Materials Science (ICMUV)
University of Valencia, Spain
- claudio
- Posts: 458
- Joined: Tue Mar 31, 2009 11:33 pm
- Location: Marseille
- Contact:
Re: Instructions ypp -r
Ciao Alejandro
infact the full inversion of the BSE equation requires a lot of memory,
I advise you to run in parallel the BSE. You can generate the input for the matrix with
yambo -o b -b
and than solve it
yambo -o b -b -y i
and to run yambo in serial do: yambo -N
you can find here the reference to the method:
http://prb.aps.org/abstract/PRB/v86/i12/e125203
ciao
cla
infact the full inversion of the BSE equation requires a lot of memory,
I advise you to run in parallel the BSE. You can generate the input for the matrix with
yambo -o b -b
and than solve it
yambo -o b -b -y i
and to run yambo in serial do: yambo -N
you can find here the reference to the method:
http://prb.aps.org/abstract/PRB/v86/i12/e125203
ciao
cla
Claudio Attaccalite
[CNRS/ Aix-Marseille Université/ CINaM laborarory / TSN department
Campus de Luminy – Case 913
13288 MARSEILLE Cedex 09
web site: http://www.attaccalite.com
[CNRS/ Aix-Marseille Université/ CINaM laborarory / TSN department
Campus de Luminy – Case 913
13288 MARSEILLE Cedex 09
web site: http://www.attaccalite.com