GW PPA termination with no error

Concerns issues with computing quasiparticle corrections to the DFT eigenvalues - i.e., the self-energy within the GW approximation (-g n), or considering the Hartree-Fock exchange only (-x)

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shobhit21287
Posts: 13
Joined: Sat Aug 05, 2023 6:10 am

Re: GW PPA termination with no error

Post by shobhit21287 » Thu Oct 05, 2023 12:49 pm

Dead Daniele,
We installed the new version of yambo, here are the config logs for the same.
We reran the same GW calculations after producing the save file again, however this time, we encountered a different error. We are attaching the report, input and the log files here again.
report.txt
l-gw_ppa_forum_30_1_HF_and_locXC_gw0_dyson_em1d_ppa_el_el_corr_CPU_1.txt
config-5.2.0.log
Thanks a lot for your time.
Best,
Shobhit
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Shobhit Pandey
Undergraduate Researcher
QEL Lab, Indraprastha Institute of Information Technology, Delhi

shobhit21287
Posts: 13
Joined: Sat Aug 05, 2023 6:10 am

Re: GW PPA termination with no error

Post by shobhit21287 » Thu Oct 05, 2023 12:51 pm

Dear Daniele

I am attaching the rest of the files in this post
conifg-5.1.2.log
gw_ppa.txt
Best,
Shobhit
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Shobhit Pandey
Undergraduate Researcher
QEL Lab, Indraprastha Institute of Information Technology, Delhi

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Daniele Varsano
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Re: GW PPA termination with no error

Post by Daniele Varsano » Fri Oct 06, 2023 8:42 am

Dear Shobit,

in our system you have 46 occupied bands, ess the report file:

Code: Select all

[X] === Gaps and Widths ===
  [X] Conduction Band Min                           :  1.280137 [eV]
  [X] Valence Band Max                              :  0.000000 [eV]
  [X] Filled Bands                                  :   46
  [X] Empty Bands                                   :   47  105
and you are trying to calculate the electronic screening using only 30 bands:

Code: Select all

% BndsRnXp
   1 | 30 |                         # [Xp] Polarization function bands
%
In the polarizability expression Xo (see https://www.yambo-code.eu/wiki/index.php/Cheatsheets) you have a sum-over-state so you need to include at least one empty state. Then the number of empty states is a parameter that has to be converged.

Best,
Daniele
Dr. Daniele Varsano
S3-CNR Institute of Nanoscience and MaX Center, Italy
MaX - Materials design at the Exascale
http://www.nano.cnr.it
http://www.max-centre.eu/

shobhit21287
Posts: 13
Joined: Sat Aug 05, 2023 6:10 am

Re: GW PPA termination with no error

Post by shobhit21287 » Tue Oct 17, 2023 12:57 pm

Dear Daniele,
While increasing the gw bands fixed our issue, we have a new one at hand, again in the dipole matrix calculations.

Upon rerunning the gw calculations, it stopped without giving an error at the 130th iteration. We tried to change the number of bands being considered at bottom as well the issue persisted. I am attaching the log file for your reference.
l-gw_ppa_160_8_allbands2_HF_and_locXC_gw0_dyson_em1d_ppa_el_el_corr_CPU_1_01.txt
Best
Shobhit
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Shobhit Pandey
Undergraduate Researcher
QEL Lab, Indraprastha Institute of Information Technology, Delhi

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Daniele Varsano
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Re: GW PPA termination with no error

Post by Daniele Varsano » Wed Oct 18, 2023 10:51 am

Dear Shobhit,

these are not iteration, but it is the index of q points you are calculating the screening. I suggest you to have a look at what yambo is actually calculating, for instance the Yambo cheatsheet that you can find here:
https://www.yambo-code.eu/wiki/index.php/Cheatsheets

You can try to restart your calculation, ie just running again yambo, with a bettere distribution of CPU over bands:

Code: Select all

X_and_IO_CPU= "1 1 1 4 16"                 # [PARALLEL] CPUs for each role
X_and_IO_ROLEs= "q g k c v"    
balancing the CPU assigner to "c" and "v" according to how may empty bands you have included in the calculation.

Best,
Daniele
Dr. Daniele Varsano
S3-CNR Institute of Nanoscience and MaX Center, Italy
MaX - Materials design at the Exascale
http://www.nano.cnr.it
http://www.max-centre.eu/

shobhit21287
Posts: 13
Joined: Sat Aug 05, 2023 6:10 am

Re: GW PPA termination with no error

Post by shobhit21287 » Mon Oct 23, 2023 5:23 am

Dear Daniele,
After rerunning DFT calculations to check for convergence of parameters, we are now receiving the following error in setup.

[ERROR] STOP signal received while in[03] Transferred momenta grid and indexing
[ERROR] [RL indx] error in mapping

We have referred to other forum posts as well and tried multiple k-point grids, removing time inversion symmetry (for an asymmetric material) and tried the setup with NoDiagSC but none of it works.
Please guide us for the same.

Best,
Shobhit
Shobhit Pandey
Undergraduate Researcher
QEL Lab, Indraprastha Institute of Information Technology, Delhi

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Daniele Varsano
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Re: GW PPA termination with no error

Post by Daniele Varsano » Mon Oct 23, 2023 7:43 am

Dear Shobhit,
can you post your nscf QE input file and r_setup file?

Best,
Daniele
Dr. Daniele Varsano
S3-CNR Institute of Nanoscience and MaX Center, Italy
MaX - Materials design at the Exascale
http://www.nano.cnr.it
http://www.max-centre.eu/

shobhit21287
Posts: 13
Joined: Sat Aug 05, 2023 6:10 am

Re: GW PPA termination with no error

Post by shobhit21287 » Mon Oct 23, 2023 8:10 am

Dear Daniele,
Here are the files.
MoSe2_nscf.txt
r_setup.txt
Best,
Shobhit
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Shobhit Pandey
Undergraduate Researcher
QEL Lab, Indraprastha Institute of Information Technology, Delhi

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Daniele Varsano
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Joined: Tue Mar 17, 2009 2:23 pm
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Re: GW PPA termination with no error

Post by Daniele Varsano » Mon Oct 23, 2023 3:35 pm

Dear Shobhit,

I do not what is going wrong here,
I can see you are now using a version of the code which is older than the one you were using before (5.1.2).
Next, besides the spin treatment (no spin-orbit coupling), and a different structure (alat), what has changed in your k point grid?
In previous calculation you had 154 k points and now you have 151.
Can you try to repeat the calculation you did before (without NoDiagSC) using the release of the code, maybe you can spot what does differ comparing the two r_setup file.

Best,

Daniele
Dr. Daniele Varsano
S3-CNR Institute of Nanoscience and MaX Center, Italy
MaX - Materials design at the Exascale
http://www.nano.cnr.it
http://www.max-centre.eu/

shobhit21287
Posts: 13
Joined: Sat Aug 05, 2023 6:10 am

Re: GW PPA termination with no error

Post by shobhit21287 » Wed Nov 08, 2023 10:10 am

Dear Daniele,

We ran the files without and with the setup

setup
NoDiagSc

The report files and the nscf input file are attached below
nscf.txt
r_setup_nodiagsc.txt
r_setup_plain.txt
With the default yambo initialisation, we are getting an empty hf.in file where as with nodiagsc, the initialisation isn't completing as can be seen in the r_setup file

Best,
Shobhit
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Shobhit Pandey
Undergraduate Researcher
QEL Lab, Indraprastha Institute of Information Technology, Delhi

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