segmentation fault ypp

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michele guerrini
Posts: 11
Joined: Thu Mar 28, 2019 10:53 am

segmentation fault ypp

Post by michele guerrini » Wed Oct 02, 2019 1:45 pm

Hello yambo developers, I am experiencing some issues when I try to plot the exciton wavefunction as I get the following error when running ypp in interacting mode:

Code: Select all

|   Y  ||  _  ||  Y  ||  _  \ |  _  |
|   |  ||. |  ||.    ||. |  / |. |  |
 \_  _/ |. _  ||.\_/ ||. _  \ |. |  |
  |: |  |: |  ||: |  ||: |   \|: |  |
  |::|  |:.|:.||:.|:.||::.   /|::.  |
  `--"  `-- --"`-- --"`-----" `-----"


 <---> [01] CPU structure, Files & I/O Directories
 <---> [02] Y(ambo) P(ost)/(re) P(rocessor)
 <---> [03] Core DB
 <---> :: Electrons             : 194.0000
 <---> :: Temperature       [ev]: 0.000000
 <---> :: Lattice factors [a.u.]: 17.18139  16.73227  14.74106
 <---> :: K points              :  36
 <---> :: Bands                 :  600
 <---> :: Symmetries            : 2
 <---> :: RL vectors            : 233551
 <---> [04] K-point grid
 <---> :: Q-points   (IBZ):  36
 <---> :: X K-points (IBZ):  36
 <---> [05] CORE Variables Setup
 <---> [05.01] Unit cells
 <---> [05.02] Symmetries
 <---> [05.03] RL shells
 <---> [05.04] K-grid lattice
 <---> [05.05] Energies [ev] & Occupations
 <---> [06] Excitonic Properties
 <---> :: Sorting energies
 <01s> [06.01] Excitonic Wave Function
 <01s> [06.01.01] Real-Space grid setup
 <01s> [WF] Performing Wave-Functions I/O from ./SAVE
 <01s> [FFT-EXCWF] Mesh size:  35   35   42Segmentation fault
I attach also the input

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#                                                           
#  __  __   ________   ___ __ __    _______   ______        
# /_/\/_/\ /_______/\ /__//_//_/\ /_______/\ /_____/\       
# \ \ \ \ \\::: _  \ \\::\| \| \ \\::: _  \ \\:::_ \ \      
#  \:\_\ \ \\::(_)  \ \\:.      \ \\::(_)  \/_\:\ \ \ \     
#   \::::_\/ \:: __  \ \\:.\-/\  \ \\::  _  \ \\:\ \ \ \    
#     \::\ \  \:.\ \  \ \\. \  \  \ \\::(_)  \ \\:\_\ \ \   
#      \__\/   \__\/\__\/ \__\/ \__\/ \_______\/ \_____\/   
#                                                           
#                                                           
# GPL Version 4.3.2 Revision 134. (Based on r.15658 h.afdb12
#                      Serial Build                         
#                http://www.yambo-code.org                  
#
excitons                       # [R] Excitons
wavefunction                   # [R] Wavefunction
Format= "x"                    # Output format [(c)ube/(g)nuplot/(x)crysden]
Direction= "123"                 # [rlu] [1/2/3] for 1d or [12/13/23] for 2d [123] for 3D
FFTGvecs=  20000       RL      # [FFT] Plane-waves
States= "4"                # Index of the BS state(s)
Degen_Step=   0   eV      # Maximum energy separation of two degenerate states
% Cells
 3 | 3 | 3 |                             # Number of cell repetitions in each direction (odd or 1)
%
% Hole
 -3.472     | 2.189     | 9.230     |        # [cc] Hole position in unit cell
%
Dr. Michele Guerrini
Humboldt-Universität zu Berlin
Institut für Physik und IRIS Adlershof
Zum Grossen Windkanal 6, 12489 Berlin, Germany
e-mail: guerrini@physik.hu-berlin.de
Skype: merlin__88

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Daniele Varsano
Posts: 3844
Joined: Tue Mar 17, 2009 2:23 pm
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Re: segmentation fault ypp

Post by Daniele Varsano » Wed Oct 02, 2019 2:02 pm

Dear Michele,
it is hard to spot the problem with this information and the poor error message.
Can it be an allocation problem in the interactive node?
You can try to reduce the FFTGvecs and see if this is the problem.

Best,
Daniele
Dr. Daniele Varsano
S3-CNR Institute of Nanoscience and MaX Center, Italy
MaX - Materials design at the Exascale
http://www.nano.cnr.it
http://www.max-centre.eu/

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