I am working on optical spectra (RPA level) of 2D monolayers, for which, as far as I have understood, the box cutoff and the RIM integration are mandatory, for improving the vacuum-space convergence and q (G-space) integration. However, even for not fully converged results, I was expecting to find some consistent results, instead for an almost-metallic behaviour I am finding that IP, LF (in e-h space) and ALDA(in e-h space) spectra are in good agreement, while the LF one in G-space, with and without RIM-cut are not. This is for a supercell with 20A vertical separation between two replicated sheets. Increasing that space to 40,80 and further the LF spectrum in G-space not cut converges to the IP one, but the same is not happening when the RIM-cut runlevel is considered, or least more slowly than the uncut one.
Should that cutoff a way to almost avoid increasing the vacuum size (at least not more than required to have the total energy converged at SCF level)?
This reported below is an example of a report:
Code: Select all
Y88b / e e e 888~~\ ,88~-_
Y88b / d8b d8b d8b 888 | d888 \
Y88b/ /Y88b d888bdY88b 888 _/ 88888 |
Y8Y / Y88b / Y88Y Y888b 888 \ 88888 |
Y /____Y88b / YY Y888b 888 | Y888 /
/ / Y88b / Y888b 888__/ `88_-~
GPL Version 4.1.2 Revision 76
MPI Build
http://www.yambo-code.org
11/27/2017 at 19:12 YAMBO @ jigen117
[01] CPU structure, Files & I/O Directories
===========================================
* CPU-Threads :32(CPU)-1(threads)-1(threads@X)-1(threads@DIP)-1(threads@SE)-1(threads@RT)-1(threads@K)
* MPI CPU : 32
* THREADS (max): 1
* THREADS TOT(max): 32
* I/O NODES : 1
* Fragmented WFs :yes
CORE databases in .
Additional I/O in .
Communications in .
Input file is lf_cut.in
Report file is ./r-lf_cut_e100_optics_chi_rim_cut
Job string(main): lf_cut_e100
Log files in ./LOG
[RD./SAVE//ns.db1]------------------------------------------
Bands : 20
K-points : 7
G-vectors [RL space]: 453669
Components [wavefunctions]: 56961
Symmetries [spatial+T-rev]: 12
Spinor components : 1
Spin polarizations : 1
Temperature [ev]: 0.02585
Electrons : 8.000000
WF G-vectors : 71915
Max atoms/species : 2
No. of atom species : 1
Magnetic symmetries : no
- S/N 002584 -------------------------- v.04.01.02 r.00076 -
[02] CORE Variables Setup
=========================
[02.01] Unit cells
==================
Unit cell is HCP
... containing 2Si atoms
... with scaling factors [a.u.]: 7.2571 6.2848 302.3562
Direct Lattice(DL) unit cell [iru / cc(a.u.)]
A1 = 1.000000 0.000000 -0.000000 7.257094 0.000000 -0.000000
A2 =-0.500000 1.000000 -0.000000 -3.628547 6.284828 -0.000000
A3 =-0.000000 0.000000 1.000000 -0.000000 0.000000 302.3562
DL volume [au]:0.1379E+5
Reciprocal Lattice(RL) unit cell [iku / cc]
B1 = 1.000000 0.500000 0.000000 0.865799 0.499869 0.000000
B2 = 0.000000 1.000000 0.000000 -0.000000 0.999739 -0.000000
B3 = 0.000000 0.000000 1.000000 0.000000 0.000000 0.02078
[02.02] Symmetries
==================
DL (S)ymmetries [cc]
[S1] 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000
[S2]-0.500000 0.866025 0.000000 -0.866025 -0.500000 0.000000 0.000000 0.000000 1.000000
[S3]-0.500000 -0.866025 0.000000 0.866025 -0.500000 0.000000 0.000000 0.000000 1.000000
[S4]-1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000
[S5] 0.500000 0.866025 0.000000 0.866025 -0.500000 0.000000 0.000000 0.000000 1.000000
[S6] 0.500000 -0.866025 0.000000 -0.866025 -0.500000 0.000000 0.000000 0.000000 1.000000
[SYMs] Time-reversal derived K-space symmetries: 7 12
[SYMs] Spatial inversion 7 is NOT a symmetry
[SYMs] Group table built correctly
[02.03] RL shells
=================
Shells, format: [S#] G_RL(mHa)
[S7202]:126545(0.3325E+5) [S7201]:126533(0.3325E+5) [S7200]:126509(0.3324E+5) [S7199]:126497(0.3324
[S7198]:126473(0.3324E+5) [S7197]:126461(0.3323E+5) [S7196]:126437(0.3323E+5) [S7195]:126425(0.3322
[S7194]:126401(0.3322E+5) [S7193]:126377(0.3321E+5) [S7192]:126353(0.3321E+5) [S7191]:126329(0.3321
[S7190]:126293(0.3321E+5) [S7189]:126281(0.3320E+5) [S7188]:126257(0.3320E+5) [S7187]:126233(0.3320
[S7186]:126221(0.3319E+5) [S7185]:126197(0.3319E+5) [S7184]:126173(0.3319E+5) [S7183]:126161(0.3318
[S7182]:126159(0.3318E+5) [S7181]:126147(0.3317E+5) [S7180]:126135(0.3317E+5) [S7179]:126123(0.3317
[S7178]:126099(0.3317E+5) [S7177]:126087(0.3316E+5) [S7176]:126063(0.3316E+5) [S7175]:126039(0.3315
...
[S12]:23( 26.12627) [S11]:21( 21.59196) [S10]:19( 17.48949) [S9]:17( 13.81886)
[S8]:15( 10.58006) [S7]:13( 7.773106) [S6]:11( 5.397990) [S5]:9( 3.454714)
[S4]:7( 1.943276) [S3]:5( 0.863678) [S2]:3( 0.215920) [S1]:1( 0.000000)
[02.04] K-grid lattice
======================
Compatible Grid is 2D
B1 [rlu]= 0.000000 -0.166667 0.000000
B2 =-.1667 0.7451E-8 0.000
Grid dimensions : 6 6
K lattice UC volume [au]:0.4996E-3
[02.05] Energies [ev] & Occupations
===================================
Fermi Level [ev]: -4.391939
VBM / CBm [ev]: 0.00 0.00
Electronic Temp. [ev K]: 0.2585E-1 300.0
Bosonic Temp. [ev K]: 0.2585E-1 300.0
El. density [cm-3]: 0.391E+22
States summary : Full Metallic Empty
0001-0003 0004-0005 0006-0020
[WARNING]Metallic system
N of el / N of met el: 8.000000 2.000000
Average metallic occ.: 0.500000
X BZ K-points : 36
Energy unit is electronVolt [eV]
*X* K [1] : 0.000000 0.000000 0.000000 ( cc) * Comp.s 56551 * weight 0.02778
0.000000 0.000000 0.000000 (rlu)
E -11.13685 -3.21881 -1.18580 -1.18580 2.05075 2.52101 3.06095 3.06095
E 4.259172 4.379656 4.382413 4.393561 4.417030 4.446243 4.484857 4.504270
E 4.520288 4.546415 4.589400 4.611929
*X* K [2] : 0.000000 0.166623 0.000000 ( cc) * Comp.s 56745 * weight 0.166667
0.000000 0.166667 0.000000 (rlu)
E -10.80924 -3.28399 -2.65791 -1.67138 2.20179 2.70774 4.16826 4.24399
E 4.630399 4.748819 4.760103 4.763543 4.793969 4.823809 4.830044 4.881876
E 4.892483 4.922936 4.953001 4.967037
*X* K [3] : 0.000000 0.333246 0.000000 ( cc) * Comp.s 56732 * weight 0.166667
0.000000 0.333333 0.000000 (rlu)
E -9.866490 -5.641577 -2.339036 -1.933823 1.353524 2.035668 4.523002 5.738042
E 5.891289 5.893216 5.907007 5.924979 5.957195 6.001682 6.014680 6.032928
E 6.053176 6.099071 6.125623 6.169899
*X* K [4] : 0.000000 -0.499869 0.000000 ( cc) * Comp.s 56776 * weight 0.08333
0.000000 -0.500000 0.000000 (rlu)
E -8.868067 -7.200621 -2.597208 -1.032574 0.626292 1.174327 5.555747 6.454453
E 6.658748 7.370589 7.591815 7.777803 7.780208 7.781152 7.781847 7.790524
E 7.797485 7.803358 7.813529 7.869639
*X* K [5] : 0.144300 0.249935 0.000000 ( cc) * Comp.s 56507 * weight 0.166667
0.166667 0.250000 0.000000 (rlu)
E -10.16889 -4.81644 -2.76874 -2.19630 2.38604 3.41593 3.63432 4.51842
E 5.324536 5.513863 5.515255 5.530766 5.543813 5.579462 5.627053 5.635832
E 5.656623 5.668358 5.719770 5.749071
*X* K [6] : 0.144300 0.416558 0.000000 ( cc) * Comp.s 56791 * weight 0.333333
0.166667 0.416667 0.000000 (rlu)
E -9.009522 -6.730291 -3.609693 -1.108502 1.003830 3.011943 4.852179 5.531888
E 6.403571 6.918891 7.024345 7.026677 7.039672 7.062471 7.090485 7.133208
E 7.148602 7.165528 7.191722 7.233830
*X* K [7] : 0.288600 0.499869 0.000000 ( cc) * Comp.s 56961 * weight 0.05556
0.333333 0.500000 0.000000 (rlu)
E -7.826 -7.826 -4.483 -.1825E-4 0.1825E-4 3.998 5.745 6.238
E 6.237799 7.242211 7.242261 8.265451 8.712445 8.712495 8.878121 8.915612
E 8.915620 8.915783 8.915830 8.916313
[03] Transferred momenta grid
=============================
[RD./SAVE//ndb.kindx]---------------------------------------
Fragmentation :no
Polarization last K : 7
QP states : 1 7
X grid is uniform :yes
BS scattering :no
COLL scattering :no
- S/N 002584 -------------------------- v.04.01.02 r.00076 -
IBZ Q-points : 7
BZ Q-points : 36
Q [00001] : 0.00 0.00 0.00 (iku) * weight 0.02778
Q [00002] : 0.000000 0.166667 0.000000 (iku) * weight 0.166667
Q [00003] : 0.000000 0.333333 0.000000 (iku) * weight 0.166667
Q [00004] : 0.000000 -0.500000 0.000000 (iku) * weight 0.08333
Q [00005] : 0.166667 0.250000 0.000000 (iku) * weight 0.166667
Q [00006] : 0.166667 0.416667 0.000000 (iku) * weight 0.333333
Q [00007] : 0.333333 0.500000 0.000000 (iku) * weight 0.05556
Q [00001] : 0.00 0.00 0.00 (cc ) * weight 0.02778
Q [00002] : 0.000000 0.166623 0.000000 (cc ) * weight 0.166667
Q [00003] : 0.000000 0.333246 0.000000 (cc ) * weight 0.166667
Q [00004] : 0.000000 -0.499869 0.000000 (cc ) * weight 0.08333
Q [00005] : 0.144300 0.249935 0.000000 (cc ) * weight 0.166667
Q [00006] : 0.144300 0.416558 0.000000 (cc ) * weight 0.333333
Q [00007] : 0.288600 0.499869 0.000000 (cc ) * weight 0.05556
[04] Coloumb potential Random Integration (RIM)
===============================================
[04.01] RIM initialization
==========================
* Diagonal components only detected *
8 x (sBL volume) [au]: 0.0040
sBZ random points : 1000000
Points outside the sBZ : 8014604
RL volume [au]: 0.01799
Integrated volume [au]: 0.01795
[04.02] RIM integrals
=====================
Gamma point sphere radius [au]: 0.02879
Points outside the sphere : 896970
[Int_sBZ(q=0) 1/q^2]*(Vol_sBZ)^(-1/3) = 6.386878
should be < 7.795600
[WR./lf_cut_e100//ndb.RIM]----------------------------------
Brillouin Zone Q/K grids (IBZ/BZ): 7 36 7 36
Coulombian RL components : 1
Coulombian diagonal components :yes
RIM random points : 1000000
RIM RL volume [a.u.]: 0.01795
Real RL volume [a.u.]: 0.01799
Eps^-1 reference component :0
Eps^-1 components : 0.00 0.00 0.00
RIM anysotropy factor : 0.000000
- S/N 002584 -------------------------- v.04.01.02 r.00076 -
Summary of Coulomb integrals for non-metallic bands |Q|[au] RIM/Bare:
Q [1]:0.1000E-40.8193 * Q [2]: 0.166623 1.165452
Q [5]: 0.288600 1.048097 * Q [3]: 0.333246 1.035091
Q [6]: 0.440843 1.019214 * Q [4]: 0.499869 1.014503
Q [7]: 0.577199 1.010631
CpuTiming [Min/Max/Average]: 02s/05s/04s
[05] Coloumb potential CutOff :box
==================================
Cut directions :Z
Box sides [au]: 300.0000
Symmetry test passed :yes
[WR./lf_cut_e100//ndb.cutoff]-------------------------------
Brillouin Zone Q/K grids (IBZ/BZ): 7 36 7 36
CutOff Geometry :box z
Coulomb cutoff potential :box z ******
Box sides length [au]: 0.0000 0.0000 300.0000
Sphere/Cylinder radius [au]: 0.000000
Cylinder length [au]: 0.000000
RL components : 71925
RL components used in the sum : 126545
RIM corrections included :yes
RIM RL components : 1
RIM random points : 1000000
- S/N 002584 -------------------------- v.04.01.02 r.00076 -
CpuTiming [Min/Max/Average]: 05s/07s/07s
[06] External corrections
=========================
[07] Optics
===========
[RD./SAVE//ns.kb_pp_pwscf]----------------------------------
Fragmentation :yes
- S/N 002584 -------------------------- v.04.01.02 r.00076 -
[WF] Performing Wave-Functions I/O from ./SAVE
[WF loader] Normalization (few states) min/max :0.7214E-10 0.9999
[WR./lf_cut_e100//ndb.dip_iR_and_P]-------------------------
Brillouin Zone Q/K grids (IBZ/BZ): 7 36 7 36
RL vectors (WF): 71925
Fragmentation :yes
Electronic Temperature [K]: 300.00000
Bosonic Temperature [K]: 300.00000
X band range : 1 20
X band range limits : 5 4
X e/h energy range [ev]:-1.0000000 -1.0000000
RL vectors in the sum : 71925
[r,Vnl] included :yes
Using shifted grids :no
Using covariant dipoles:no
Using G-space approach :yes
Using R-space approach :no
Direct v evaluation :no
Field momentum norm :0.10000E-4
Wavefunctions :Perdew, Burke & Ernzerhof(X)+Perdew, Burke & Ernzerhof(C)
- S/N 002584 -------------------------- v.04.01.02 r.00076 -
[WARNING] The system is a metal but Drude term not included.
[WF] Performing Wave-Functions I/O from ./SAVE
[FFT-X] Mesh size: 15 15 651
[X-CG] R(p) Tot o/o(of R) : 20 114 100
CpuTiming [Min/Max/Average]: 02m-59s/03m-05s/03m-03s
[08] Game Over & Game summary
=============================
11/27/2017 at 19:12 YAMBO @ jigen117 [start]
11/27/2017 at 19:16 [end]
Timing [Min/Max/Average]: 03m-08s/03m-32s/03m-28s
.-ACKNOWLEDGMENT
|
| The users of YAMBO have little formal obligations with respect to
| the YAMBO group (those specified in the GNU General Public
| License, http://www.gnu.org/copyleft/gpl.txt). However, it is
| common practice in the scientific literature, to acknowledge the
| efforts of people that have made the research possible. In this
| spirit, please find below the reference we kindly ask you to use
| in order to acknowledge YAMBO:
|
| Yambo: An ab initio tool for excited state calculations
| A. Marini, C. Hogan, M. Gr\"uning, D. Varsano
| Computer Physics Communications 180, 1392 (2009).
|
.-Input file : lf_cut.in
| optics # [R OPT] Optics
| chi # [R CHI] Dyson equation for Chi.
| rim_cut # [R RIM CUT] Coulomb potential
| BoseTemp= 0.02585 eV # Bosonic Temperature
| FFTGvecs= 71925 RL # [FFT] Plane-waves
| X_q_0_CPU= "16.2.1" # [PARALLEL] CPUs for each role
| X_q_0_ROLEs= "c.v.k" # [PARALLEL] CPUs roles (k,c,v)
| RandQpts= 1000000 # [RIM] Number of random q-points in the BZ
| RandGvec= 1 RL # [RIM] Coulomb interaction RS components
| CUTGeo= "box z" # [CUT] Coulomb Cutoff geometry: box/cylinder/sphere X/Y/Z/XY..
| % CUTBox
| 0.0000 | 0.0000 | 300.0000 | # [CUT] [au] Box sides
| %
| CUTRadius= 0.000000 # [CUT] [au] Sphere/Cylinder radius
| CUTCylLen= 0.000000 # [CUT] [au] Cylinder length
| Chimod= "Hartree" # [X] IP/Hartree/ALDA/LRC/BSfxc
| NGsBlkXd= 505 RL # [Xd] Response block size
| % QpntsRXd
| 1 | 1 | # [Xd] Transferred momenta
| %
| % BndsRnXd
| 1 | 20 | # [Xd] Polarization function bands
| %
| GrFnTpXd= "R" # [Xd] Green`s function (T)ordered,(R)etarded,(r)senant,(a)ntiresonant [T, R, r, Ta, Ra]
| % EnRngeXd
| 0.00000 | 10.00000 | eV # [Xd] Energy range
| %
| % DmRngeXd
| 0.10000 | 0.10000 | eV # [Xd] Damping range
| %
| ETStpsXd= 500 # [Xd] Total Energy steps
| % LongDrXd
| 0.1000E-4 | 0.000 | 0.000 | # [Xd] [cc] Electric Field
| %
I guessed that the units for specifying the vertical size of the box are Bohr because in the input one can find [au] and I am almost sure that the code is then considering half of the required side (by comparing cut and uncut potential in test CUT outputs), but for larger supercells that should not be an issue.
Why I am getting such a result is still unclear to me and I am asking for any suggestion to understand it.
Thanks,
Aldo