Dear all,
When I calculate the projection of excitons in real space, I use the 2D-BN from the tutorial. When I set Direction = "12" in the input file and import the output file o-2D_WR_WC.exc_qpt1_2d_1.xsf into VESTA, nothing is displayed. What could be the reason for this? However, when I use Direction = "123", a normal projection is displayed, but it seems to differ from what is shown in the tutorial. I have attached both types of output files. Which one is correct?
Thank you in advance for your help.
Best,
sunxl
analyse real-space exciton wavefunction
Moderators: Davide Sangalli, andrea marini, Daniele Varsano
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analyse real-space exciton wavefunction
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Dr. sunxl
Beijing Computing Science Research Center, China.
Beijing Computing Science Research Center, China.
- Daniele Varsano
- Posts: 4198
- Joined: Tue Mar 17, 2009 2:23 pm
- Contact:
Re: analyse real-space exciton wavefunction
Dear Sunxl,
the 2D plot is essentially the same of a 3D one where you have integrated over the 3rd dimension. If it is different from the tutorial, you can check the position of the hole, or it is just a matter of the considered isosurface. About the 2D plot, we will have a look to why vesta is not displaying it.
Best,
Daniele
the 2D plot is essentially the same of a 3D one where you have integrated over the 3rd dimension. If it is different from the tutorial, you can check the position of the hole, or it is just a matter of the considered isosurface. About the 2D plot, we will have a look to why vesta is not displaying it.
Best,
Daniele
Dr. Daniele Varsano
S3-CNR Institute of Nanoscience and MaX Center, Italy
MaX - Materials design at the Exascale
http://www.nano.cnr.it
http://www.max-centre.eu/
S3-CNR Institute of Nanoscience and MaX Center, Italy
MaX - Materials design at the Exascale
http://www.nano.cnr.it
http://www.max-centre.eu/
-
- Posts: 38
- Joined: Wed Aug 14, 2024 8:05 am
- Location: China
Re: analyse real-space exciton wavefunction
Dear Daniele,
Thank you for your patient explanation.
1、For two-dimensional materials, can Direction = "123" be used when projecting exciton wavefunctions?
2、How is the position of the hole determined? Is it decided by calculating the average hole density and observing which atoms have a higher concentration of holes? I read in the tutorial that it's best not to place the hole exactly on an atom but to slightly offset it from the atomic position. For two-dimensional materials, does this mean that the offset should be applied separately in the x and y directions?
I realize I have quite a few questions. Thank you for your patience in answering them.
Best,
sunxl
Thank you for your patient explanation.
1、For two-dimensional materials, can Direction = "123" be used when projecting exciton wavefunctions?
2、How is the position of the hole determined? Is it decided by calculating the average hole density and observing which atoms have a higher concentration of holes? I read in the tutorial that it's best not to place the hole exactly on an atom but to slightly offset it from the atomic position. For two-dimensional materials, does this mean that the offset should be applied separately in the x and y directions?
I realize I have quite a few questions. Thank you for your patience in answering them.
Best,
sunxl
Dr. sunxl
Beijing Computing Science Research Center, China.
Beijing Computing Science Research Center, China.
- Daniele Varsano
- Posts: 4198
- Joined: Tue Mar 17, 2009 2:23 pm
- Contact:
Re: analyse real-space exciton wavefunction
Dear sunxl,
1) Yes you can, in this case you have a 3D distribution, and you can visualize also the z density.
2) The hole position is arbitrary, usually it is suggested to set it in a symmetric point where there is consitent valence density. The suggestion to not place exactly on the atom is because you can have there a zero density of valence band, e.g. in case of pi orbitals, so it is better to displace along the z direction.
3) About the 2D plot. The structure is not displayed as there is a problem in the origin of the plot:
If you replace 8.73459911 with 0.00000 it works.
Anyway the isosurface is not correctly read, you can try to normalize the function value activating the flag #NormToOne in the input., i.e. removing the comment. It seems that while xcrsyden works correctly with E- notation e.g. (0.10073722E-10), vesta can have a problem to read it correctly.
Best,
Daniele
1) Yes you can, in this case you have a 3D distribution, and you can visualize also the z density.
2) The hole position is arbitrary, usually it is suggested to set it in a symmetric point where there is consitent valence density. The suggestion to not place exactly on the atom is because you can have there a zero density of valence band, e.g. in case of pi orbitals, so it is better to displace along the z direction.
3) About the 2D plot. The structure is not displayed as there is a problem in the origin of the plot:
Code: Select all
BEGIN_DATAGRID_2D
61 61
0.00000000 0.00000000 8.73459911
Anyway the isosurface is not correctly read, you can try to normalize the function value activating the flag #NormToOne in the input., i.e. removing the comment. It seems that while xcrsyden works correctly with E- notation e.g. (0.10073722E-10), vesta can have a problem to read it correctly.
Best,
Daniele
Dr. Daniele Varsano
S3-CNR Institute of Nanoscience and MaX Center, Italy
MaX - Materials design at the Exascale
http://www.nano.cnr.it
http://www.max-centre.eu/
S3-CNR Institute of Nanoscience and MaX Center, Italy
MaX - Materials design at the Exascale
http://www.nano.cnr.it
http://www.max-centre.eu/