Unable to get bands after ypp run with spin polarised calculation

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Dhanjit
Posts: 21
Joined: Sun Jun 12, 2022 4:18 am
Location: Tezpur, Assam, India

Unable to get bands after ypp run with spin polarised calculation

Post by Dhanjit » Tue Jul 04, 2023 7:05 am

Dear all,
I am having trouble obtaining the spin polarized band structure after ypp run.

Code: Select all

#                                                                     
#  /$$     /$$ /$$$$$$  /$$      /$$ /$$$$$$$   /$$$$$$               
# |  $$   /$$//$$__  $$| $$$    /$$$| $$__  $$ /$$__  $$              
#  \  $$ /$$/| $$  \ $$| $$$$  /$$$$| $$  \ $$| $$  \ $$              
#   \  $$$$/ | $$$$$$$$| $$ $$/$$ $$| $$$$$$$ | $$  | $$              
#    \  $$/  | $$__  $$| $$  $$$| $$| $$__  $$| $$  | $$              
#     | $$   | $$  | $$| $$\  $ | $$| $$  \ $$| $$  | $$              
#     | $$   | $$  | $$| $$ \/  | $$| $$$$$$$/|  $$$$$$/              
#     |__/   |__/  |__/|__/     |__/|_______/  \______/               
#                                                                     
#      Version 5.0.1 Revision 19547 Hash e90d90f2d                    
#                       Branch is                                     
#                   MPI+HDF5_IO Build                                 
#               http://www.yambo-code.org                             
#
# 
# 07/04/2023 at 10:33 ypp @ compute2 [start]
# 07/04/2023 at 10:33                [end]
#
# .-Input file  ypp_bands.in
# | electrons                        # [R] Electronic properties
# | bnds                             # [R] Bands
# | BoseTemp= 0.000000         eV    # Bosonic Temperature
# | PROJECT_mode= "none"             # Instruct ypp how to project the DOS. ATOM, LINE, PLANE.
# | INTERP_mode= "NN"                # Interpolation mode (NN=nearest point, BOLTZ=boltztrap aproach)
# | INTERP_Shell_Fac= 20.00000       # The bigger it is a higher number of shells is used
# | INTERP_NofNN= 1                  # Number of Nearest sites in the NN method
# | OutputAlat= 0.000000             # [a.u.] Lattice constant used for "alat" ouput format
# | cooIn= "rlu"                     # Points coordinates (in) cc/rlu/iku/alat
# | cooOut= "rlu"                    # Points coordinates (out) cc/rlu/iku/alat
# | % BANDS_bands
# |   59 |  68 |                         # Number of bands
# | %
# | CIRCUIT_E_DB_path= "none"        # SAVE obtained from the QE `bands` run (alternative to %BANDS_kpts)
# | BANDS_path= " G S X1 G"          # High-Symmetry points labels (G,M,K,L...) also using composed positions (0.5xY+0.5xL).
# | BANDS_steps= 30                  # Number of divisions
# | #BANDS_built_in                # Print the bands of the generating points of the circuit using the nearest internal point
# | %BANDS_kpts                      # K points of the bands circuit
# |  0.000000| 0.000000| 0.000000|
# |  0.500000| 0.000000| 0.000000|
# |  0.666670| 0.333330| 0.000000|
# |  0.000000| 0.000000| 0.000000|
# | %
This is the human readable output file for spin down states. Am I not suppose to get the band path in # 07/04/2023 at 10:33 ypp @ compute2 [start]
# 07/04/2023 at 10:33 [end]
section?

Any help will be greatly appreciated.
Dhanjit Talukdar
Research Scholar,
Optoelectronics and Photonics Laboratory,
Department of Physics,
Tezpur University, Assam, India

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Daniele Varsano
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Re: Unable to get bands after ypp run with spin polarised calculation

Post by Daniele Varsano » Tue Jul 04, 2023 8:04 am

Dear Dhanjit ,
please sign your post with your name and affiliation, this is a rule of the forum and you can do once for all by filling the signature in your user profile.
The input seems correct, ypp should produce a report file named r_electrons* and an output file containing the result of the band structure.
Can you please post your r_setup file?

Best,

Daniele
Dr. Daniele Varsano
S3-CNR Institute of Nanoscience and MaX Center, Italy
MaX - Materials design at the Exascale
http://www.nano.cnr.it
http://www.max-centre.eu/

Dhanjit
Posts: 21
Joined: Sun Jun 12, 2022 4:18 am
Location: Tezpur, Assam, India

Re: Unable to get bands after ypp run with spin polarised calculation

Post by Dhanjit » Tue Jul 04, 2023 12:27 pm

Dear Daniele,
Thank you for getting back with a fast reply and do accept my sincere apologies for posting it without affiliation.
I have attached a zip file containing (a) r_setup, (b) r_electrons_bnds, (c) o.bands_interpolated_spin-dn, and (d) o.bands_interpolated_spin-up files.
As much as I know the calculation without spin polarisation yields the values of the GW band in o.bands_interpolated files. In my case they seem to be generated without the GW structure.
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Dhanjit Talukdar
Research Scholar,
Optoelectronics and Photonics Laboratory,
Department of Physics,
Tezpur University, Assam, India

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Daniele Varsano
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Re: Unable to get bands after ypp run with spin polarised calculation

Post by Daniele Varsano » Wed Jul 05, 2023 7:57 am

Dear Dhanjit,

unfortunately, I cannot see anything wrong in your report, so it is not easy to spot the problem.
In your report, I can see that GW correction are correctly read, but then the output is empty.
Can you try to rerun reducing the number of bands (e.g. 67-70) and leave empty the BANDS_path field?
Also, please change INTERP_mode= "NN" to INTERP_mode= "BOLTZ"

I do not think this will solve the problem, but let's give a try. If not successful we will need to reproduce your problem and investigate.

Best,
Daniele
Dr. Daniele Varsano
S3-CNR Institute of Nanoscience and MaX Center, Italy
MaX - Materials design at the Exascale
http://www.nano.cnr.it
http://www.max-centre.eu/

Dhanjit
Posts: 21
Joined: Sun Jun 12, 2022 4:18 am
Location: Tezpur, Assam, India

Re: Unable to get bands after ypp run with spin polarised calculation

Post by Dhanjit » Wed Jul 05, 2023 5:17 pm

Dear Daniele,
I have tried reducing the bands and changed INTERP_mode= "NN" to INTERP_mode= "BOLTZ". Tried it with excluding the band path as well. But, the results are all the same. Could not get the GW bands. Now I am running the PWSCF codes again to see if it reproduces the same error.
Dhanjit Talukdar
Research Scholar,
Optoelectronics and Photonics Laboratory,
Department of Physics,
Tezpur University, Assam, India

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Daniele Varsano
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Re: Unable to get bands after ypp run with spin polarised calculation

Post by Daniele Varsano » Mon Jul 10, 2023 7:50 am

Dear Dhanjit,
ok let us know. If it does not work, please post your qe input file and pseudo and we will try to reproduce the error to spot the problem.
Best,
Daniele
Dr. Daniele Varsano
S3-CNR Institute of Nanoscience and MaX Center, Italy
MaX - Materials design at the Exascale
http://www.nano.cnr.it
http://www.max-centre.eu/

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Davide Sangalli
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Re: Unable to get bands after ypp run with spin polarised calculation

Post by Davide Sangalli » Tue Jul 11, 2023 10:26 pm

Dear Dhanjit,
from the report you are using version 5.0.1

Can you try either 5.0.4 (it contains just few fixes compared to 5.0.1) or 5.1.2 (it contains also new features).
https://github.com/yambo-code/yambo/wik ... gz-format)

Best,
D.
Davide Sangalli, PhD
CNR-ISM, Division of Ultrafast Processes in Materials (FLASHit) and MaX Centre
https://sites.google.com/view/davidesangalli
http://www.max-centre.eu/

Dhanjit
Posts: 21
Joined: Sun Jun 12, 2022 4:18 am
Location: Tezpur, Assam, India

Re: Unable to get bands after ypp run with spin polarised calculation

Post by Dhanjit » Thu Jul 13, 2023 4:40 pm

Dear Daniele,
I have tried running the QE files again, and went through the whole procedure once more. The result remains the same. I am attaching the input files for QE.
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Dhanjit Talukdar
Research Scholar,
Optoelectronics and Photonics Laboratory,
Department of Physics,
Tezpur University, Assam, India

Dhanjit
Posts: 21
Joined: Sun Jun 12, 2022 4:18 am
Location: Tezpur, Assam, India

Re: Unable to get bands after ypp run with spin polarised calculation

Post by Dhanjit » Thu Jul 13, 2023 4:43 pm

Dear Davide ,
Do accept my gratitude for writing back on the post.
Thank you for the suggestion. I'll ask my HPC coordinator to install the latest version of YAMBO to re-run the calculations again.
Dhanjit Talukdar
Research Scholar,
Optoelectronics and Photonics Laboratory,
Department of Physics,
Tezpur University, Assam, India

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Daniele Varsano
Posts: 3816
Joined: Tue Mar 17, 2009 2:23 pm
Contact:

Re: Unable to get bands after ypp run with spin polarised calculation

Post by Daniele Varsano » Thu Jul 20, 2023 5:05 pm

Dear Dhanjit,

please try with a newer release of the code. If the problem persists, we will reproduce the error to spot what's going wrong.

Best,
Daniele
Dr. Daniele Varsano
S3-CNR Institute of Nanoscience and MaX Center, Italy
MaX - Materials design at the Exascale
http://www.nano.cnr.it
http://www.max-centre.eu/

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